<?xml version="1.0" ?>
<!--
  (c) 2024, The Regents of the University of California, through Lawrence Berkeley National Laboratory (subject to receipt of any required approvals from the U.S. Dept. of Energy).
  All rights reserved.

  CLOCKSS system has permission to ingest, preserve, and serve this Archival Unit.
  LOCKSS system has permission to ingest, preserve, and serve this Archival Unit.

  This content is licensed under a Creative Commons Attribution 3.0 International license: https://creativecommons.org/licenses/by/3.0/
-->
<taxon doi="10.1601/tx.32077" rank="species" xmlns="http://namesforlife.com/ns/taxon">
  <nomenclature xmlns="http://namesforlife.com/ns/common">
    <name-status-group>
      <identifier doi="10.1601/nm.32077" nomenclatural-type-exemplar="10.1601/ex.32077" rank="species" taxon-doi="10.1601/tx.32077">Scalindua profunda</identifier>
      <authority>van de Vossenberg et al. 2013</authority>
      <status candidatus="true" conserved="false" current-name="Scalindua profunda" current-name-doi="10.1601/nm.32077" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
    </name-status-group>
  </nomenclature>
  <nomenclatural-type nomenclatural-type-exemplar="10.1601/ex.32077" xmlns="http://namesforlife.com/ns/common" />
  <taxonomic-equivalence />
  <ancestor doi="10.1601/tx.0" rank="root">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.0" rank="root" taxon-doi="10.1601/tx.0">Universal Root</identifier>
        <authority>Woese et al. 1990</authority>
        <status candidatus="false" conserved="false" current-name="Universal Root" current-name-doi="10.1601/nm.0" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
    <ancestor doi="10.1601/tx.419" rank="domain">
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.419" rank="domain" taxon-doi="10.1601/tx.419">Bacteria</identifier>
          <authority>(None 2015) Woese et al. 1990</authority>
          <status candidatus="false" conserved="false" current-name="Bacteria" current-name-doi="10.1601/nm.419" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
        </name-status-group>
      </nomenclature>
      <ancestor doi="10.1601/tx.7744" rank="phylum">
        <nomenclature xmlns="http://namesforlife.com/ns/common">
          <name-status-group>
            <identifier doi="10.1601/nm.7744" nomenclatural-type="10.1601/tx.7748" nomenclatural-type-exemplar="10.1601/ex.7749" rank="phylum" taxon-doi="10.1601/tx.7744">Planctomycetes</identifier>
            <authority>(sic) Garrity and Holt 2021</authority>
            <status candidatus="false" conserved="false" current-name="Planctomycetota" current-name-doi="10.1601/nm.31631" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="NVP" />
          </name-status-group>
          <name-status-group>
            <identifier doi="10.1601/nm.31631" nomenclatural-type="10.1601/tx.7748" nomenclatural-type-exemplar="10.1601/ex.7749" rank="phylum" taxon-doi="10.1601/tx.7744">Planctomycetota</identifier>
            <authority>corrig. Garrity and Holt 2021</authority>
            <status candidatus="false" conserved="false" current-name="Planctomycetota" current-name-doi="10.1601/nm.31631" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
          </name-status-group>
        </nomenclature>
        <ancestor doi="10.1601/tx.31271" rank="class">
          <nomenclature xmlns="http://namesforlife.com/ns/common">
            <name-status-group>
              <identifier doi="10.1601/nm.31271" nomenclatural-type="10.1601/tx.7746" nomenclatural-type-exemplar="10.1601/ex.7749" rank="class" taxon-doi="10.1601/tx.31271">Planctomycetia</identifier>
              <authority>(Cavalier-Smith 2002) Ward 2020</authority>
              <status candidatus="false" conserved="false" current-name="Planctomycetia" current-name-doi="10.1601/nm.31271" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
            </name-status-group>
          </nomenclature>
          <ancestor doi="10.1601/tx.31280" rank="order">
            <nomenclature xmlns="http://namesforlife.com/ns/common">
              <name-status-group>
                <identifier doi="10.1601/nm.31280" rank="order" taxon-doi="10.1601/tx.31280">Brocadiales</identifier>
                <authority>Jetten et al. 2010</authority>
                <status candidatus="true" conserved="false" current-name="Brocadiales" current-name-doi="10.1601/nm.31280" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
              </name-status-group>
            </nomenclature>
            <ancestor doi="10.1601/tx.31281" rank="family">
              <nomenclature xmlns="http://namesforlife.com/ns/common">
                <name-status-group>
                  <identifier doi="10.1601/nm.31281" rank="family" taxon-doi="10.1601/tx.31281">Brocadiaceae</identifier>
                  <authority>Jetten et al. 2010</authority>
                  <status candidatus="true" conserved="false" current-name="Brocadiaceae" current-name-doi="10.1601/nm.31281" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
                </name-status-group>
              </nomenclature>
              <ancestor doi="10.1601/tx.31286" rank="genus">
                <nomenclature xmlns="http://namesforlife.com/ns/common">
                  <name-status-group>
                    <identifier doi="10.1601/nm.31286" rank="genus" taxon-doi="10.1601/tx.31286">Scalindua</identifier>
                    <authority>Woebken et al. 2008</authority>
                    <status candidatus="true" conserved="false" current-name="Scalindua" current-name-doi="10.1601/nm.31286" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
                  </name-status-group>
                </nomenclature>
                <ancestor doi="10.1601/tx.32077" rank="species">
                  <nomenclature xmlns="http://namesforlife.com/ns/common">
                    <name-status-group>
                      <identifier doi="10.1601/nm.32077" nomenclatural-type-exemplar="10.1601/ex.32077" rank="species" taxon-doi="10.1601/tx.32077">Scalindua profunda</identifier>
                      <authority>van de Vossenberg et al. 2013</authority>
                      <status candidatus="true" conserved="false" current-name="Scalindua profunda" current-name-doi="10.1601/nm.32077" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
                    </name-status-group>
                  </nomenclature>
                </ancestor>
              </ancestor>
            </ancestor>
          </ancestor>
        </ancestor>
      </ancestor>
    </ancestor>
  </ancestor>
  <parent doi="10.1601/tx.31286" rank="genus">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.31286" rank="genus" taxon-doi="10.1601/tx.31286">Scalindua</identifier>
        <authority>Woebken et al. 2008</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua" current-name-doi="10.1601/nm.31286" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </parent>
  <sibling doi="10.1601/tx.31292" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.31292" nomenclatural-type-exemplar="10.1601/ex.31292" rank="species" taxon-doi="10.1601/tx.31292">Scalindua brodae</identifier>
        <authority>Schmid et al. 2003</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua brodae" current-name-doi="10.1601/nm.31292" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.31293" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.31293" nomenclatural-type-exemplar="10.1601/ex.31293" rank="species" taxon-doi="10.1601/tx.31293">Scalindua sorokinii</identifier>
        <authority>Kuypers et al. 2003</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua sorokinii" current-name-doi="10.1601/nm.31293" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.31294" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.31294" nomenclatural-type-exemplar="10.1601/ex.31294" rank="species" taxon-doi="10.1601/tx.31294">Scalindua wagneri</identifier>
        <authority>Schmid et al. 2003</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua wagneri" current-name-doi="10.1601/nm.31294" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.31295" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.31295" nomenclatural-type-exemplar="10.1601/ex.31295" rank="species" taxon-doi="10.1601/tx.31295">Scalindua arabica</identifier>
        <authority>Woebken et al. 2008</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua arabica" current-name-doi="10.1601/nm.31295" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.32076" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.32076" nomenclatural-type-exemplar="10.1601/ex.32076" rank="species" taxon-doi="10.1601/tx.32076">Scalindua pacifica</identifier>
        <authority>Dang et al. 2013</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua pacifica" current-name-doi="10.1601/nm.32076" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.32078" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.32078" nomenclatural-type-exemplar="10.1601/ex.32078" rank="species" taxon-doi="10.1601/tx.32078">Scalindua richardsii</identifier>
        <authority>Fuchsman et al. 2012</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua richardsii" current-name-doi="10.1601/nm.32078" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.34310" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.34310" nomenclatural-type-exemplar="10.1601/ex.34310" rank="species" taxon-doi="10.1601/tx.34310">Scalindua japonica</identifier>
        <authority>Oshiki et al. 2017</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua japonica" current-name-doi="10.1601/nm.34310" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.34635" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.35381" nomenclatural-type-exemplar="10.1601/ex.34635" rank="species" taxon-doi="10.1601/tx.34635">Scalindua flavimaris</identifier>
        <authority>corrig. Ahmed et al. 2017</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua flavimaris" current-name-doi="10.1601/nm.35381" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
      <name-status-group>
        <identifier doi="10.1601/nm.34635" nomenclatural-type-exemplar="10.1601/ex.34635" rank="species" taxon-doi="10.1601/tx.34635">Scalindua flavia</identifier>
        <authority>(sic) Ahmed et al. 2017</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua flavimaris" current-name-doi="10.1601/nm.35381" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.34658" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.34658" nomenclatural-type-exemplar="10.1601/ex.34658" rank="species" taxon-doi="10.1601/tx.34658">Scalindua rubra</identifier>
        <authority>Speth et al. 2017</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua rubra" current-name-doi="10.1601/nm.34658" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.41729" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.41729" nomenclatural-type-exemplar="10.1601/ex.41729" rank="species" taxon-doi="10.1601/tx.41729">Scalindua sediminis</identifier>
        <authority>Zhao et al. 2020</authority>
        <status candidatus="true" conserved="false" current-name="Scalindua sediminis" current-name-doi="10.1601/nm.41729" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <exemplars xmlns="http://namesforlife.com/ns/exemplar">
    <exemplar doi="10.1601/ex.32077" is-uncultivated="true">
      <identifiers />
      <features>
        <feature code="10.1601.fr.16S" description="16S gene" id="EU142948" reference="rid.20066" source="reference" url="https://www.ncbi.nlm.nih.gov/nuccore/EU142948" />
        <feature code="10.1601.fr.16S" description="16S gene" id="EU142947" reference="rid.20066" source="reference" url="https://www.ncbi.nlm.nih.gov/nuccore/EU142947" />
      </features>
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.32077" nomenclatural-type-exemplar="10.1601/ex.32077" rank="species" taxon-doi="10.1601/tx.32077">Scalindua profunda</identifier>
          <authority>van de Vossenberg et al. 2013</authority>
          <status candidatus="true" conserved="false" current-name="Scalindua profunda" current-name-doi="10.1601/nm.32077" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
        </name-status-group>
      </nomenclature>
      <bibliography xmlns="http://namesforlife.com/ns/reference">
        <reference id="rid.20066">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>van de Vossenberg</surname>
                <given-names>J.</given-names>
              </person-name>
              <person-name>
                <surname>Rattray</surname>
                <given-names>J.E.</given-names>
              </person-name>
              <person-name>
                <surname>Geerts</surname>
                <given-names>W.</given-names>
              </person-name>
              <person-name>
                <surname>Kartal</surname>
                <given-names>B.</given-names>
              </person-name>
              <person-name>
                <surname>van Niftrik</surname>
                <given-names>L.</given-names>
              </person-name>
              <person-name>
                <surname>van Donselaar</surname>
                <given-names>E.G.</given-names>
              </person-name>
              <person-name>
                <surname>Sinninghe Damsté</surname>
                <given-names>J.S.</given-names>
              </person-name>
              <person-name>
                <surname>Strous</surname>
                <given-names>M.</given-names>
              </person-name>
              <person-name>
                <surname>Jetten</surname>
                <given-names>M.S.M.</given-names>
              </person-name>
            </authors>
            <article-title>Enrichment and characterization of marine anammox bacteria associated with global nitrogen gas production.</article-title>
            <year>2008</year>
            <volume>10</volume>
            <issue>11</issue>
            <fpage>3120</fpage>
            <lpage>3129</lpage>
            <source id="359">Environmental Microbiology</source>
            <abbrev>Environ Microbiol</abbrev>
            <issn>1462-2912</issn>
            <essn>1462-2920</essn>
            <pub-id pub-id-type="doi">10.1111/j.1462-2920.2008.01643.x</pub-id>
            <pub-id pub-id-type="pmid">18462401</pub-id>
          </citation>
        </reference>
      </bibliography>
      <annotation xmlns="http://namesforlife.com/ns/common">
        <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="22:05:22" time-formatted="22:05 PM" />
        <modified curator="Charles Parker" date="2018-09-25" date-formatted="September 25, 2018" time="19:25:57" time-formatted="19:25 PM" />
        <created curator="Charles Parker" date="2018-09-25" date-formatted="September 25, 2018" time="18:29:37" time-formatted="18:29 PM" />
        <curatorial-note>TODO: The metagenome is apparent available from JGI.</curatorial-note>
        <public-note>This exemplar represents an enrichment culture from van de Vossenberg et al. 2008.</public-note>
      </annotation>
    </exemplar>
  </exemplars>
  <bibliography xmlns="http://namesforlife.com/ns/reference">
    <reference id="rid.20066">
      <citation citation-type="journal">
        <authors>
          <person-name>
            <surname>van de Vossenberg</surname>
            <given-names>J.</given-names>
          </person-name>
          <person-name>
            <surname>Rattray</surname>
            <given-names>J.E.</given-names>
          </person-name>
          <person-name>
            <surname>Geerts</surname>
            <given-names>W.</given-names>
          </person-name>
          <person-name>
            <surname>Kartal</surname>
            <given-names>B.</given-names>
          </person-name>
          <person-name>
            <surname>van Niftrik</surname>
            <given-names>L.</given-names>
          </person-name>
          <person-name>
            <surname>van Donselaar</surname>
            <given-names>E.G.</given-names>
          </person-name>
          <person-name>
            <surname>Sinninghe Damsté</surname>
            <given-names>J.S.</given-names>
          </person-name>
          <person-name>
            <surname>Strous</surname>
            <given-names>M.</given-names>
          </person-name>
          <person-name>
            <surname>Jetten</surname>
            <given-names>M.S.M.</given-names>
          </person-name>
        </authors>
        <article-title>Enrichment and characterization of marine anammox bacteria associated with global nitrogen gas production.</article-title>
        <year>2008</year>
        <volume>10</volume>
        <issue>11</issue>
        <fpage>3120</fpage>
        <lpage>3129</lpage>
        <source id="359">Environmental Microbiology</source>
        <abbrev>Environ Microbiol</abbrev>
        <issn>1462-2912</issn>
        <essn>1462-2920</essn>
        <pub-id pub-id-type="doi">10.1111/j.1462-2920.2008.01643.x</pub-id>
        <pub-id pub-id-type="pmid">18462401</pub-id>
      </citation>
    </reference>
  </bibliography>
  <annotation xmlns="http://namesforlife.com/ns/common">
    <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="22:05:23" time-formatted="22:05 PM" />
    <modified curator="Charles Parker" date="2018-10-02" date-formatted="October 2, 2018" time="20:14:08" time-formatted="20:14 PM" />
    <created curator="Charles Parker" date="2018-09-25" date-formatted="September 25, 2018" time="16:39:31" time-formatted="16:39 PM" />
  </annotation>
</taxon>
