<?xml version="1.0" ?>
<!--
  (c) 2024, The Regents of the University of California, through Lawrence Berkeley National Laboratory (subject to receipt of any required approvals from the U.S. Dept. of Energy).
  All rights reserved.

  CLOCKSS system has permission to ingest, preserve, and serve this Archival Unit.
  LOCKSS system has permission to ingest, preserve, and serve this Archival Unit.

  This content is licensed under a Creative Commons Attribution 3.0 International license: https://creativecommons.org/licenses/by/3.0/
-->
<taxon doi="10.1601/tx.7792" rank="species" xmlns="http://namesforlife.com/ns/taxon">
  <nomenclature xmlns="http://namesforlife.com/ns/common">
    <name-status-group>
      <identifier doi="10.1601/nm.7792" nomenclatural-type-exemplar="10.1601/ex.7792" rank="species" taxon-doi="10.1601/tx.7792">Waddlia chondrophila</identifier>
      <authority>Rurangirwa et al. 1999 emend. García-López et al. 2019</authority>
      <status candidatus="false" conserved="false" current-name="Waddlia chondrophila" current-name-doi="10.1601/nm.7792" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
    </name-status-group>
  </nomenclature>
  <nomenclatural-type nomenclatural-type-exemplar="10.1601/ex.7792" xmlns="http://namesforlife.com/ns/common" />
  <taxonomic-equivalence>
    <related-taxon accession="71667" nomos="NCBI Taxonomy" rank="species" relation="exactMatch" />
  </taxonomic-equivalence>
  <ancestor doi="10.1601/tx.0" rank="root">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.0" rank="root" taxon-doi="10.1601/tx.0">Universal Root</identifier>
        <authority>Woese et al. 1990</authority>
        <status candidatus="false" conserved="false" current-name="Universal Root" current-name-doi="10.1601/nm.0" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
    <ancestor doi="10.1601/tx.419" rank="domain">
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.419" rank="domain" taxon-doi="10.1601/tx.419">Bacteria</identifier>
          <authority>(None 2015) Woese et al. 1990</authority>
          <status candidatus="false" conserved="false" current-name="Bacteria" current-name-doi="10.1601/nm.419" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
        </name-status-group>
      </nomenclature>
      <ancestor doi="10.1601/tx.7762" rank="phylum">
        <nomenclature xmlns="http://namesforlife.com/ns/common">
          <name-status-group>
            <identifier doi="10.1601/nm.31614" nomenclatural-type="10.1601/tx.7766" nomenclatural-type-exemplar="10.1601/ex.7767" rank="phylum" taxon-doi="10.1601/tx.7762">Chlamydiota</identifier>
            <authority>corrig. Garrity and Holt 2021</authority>
            <status candidatus="false" conserved="false" current-name="Chlamydiota" current-name-doi="10.1601/nm.31614" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
          </name-status-group>
          <name-status-group>
            <identifier doi="10.1601/nm.7762" nomenclatural-type="10.1601/tx.7766" nomenclatural-type-exemplar="10.1601/ex.7767" rank="phylum" taxon-doi="10.1601/tx.7762">Chlamydiae</identifier>
            <authority>(sic) Garrity and Holt 2021 non Chlamydiae Cavalier-Smith 2002</authority>
            <status candidatus="false" conserved="false" current-name="Chlamydiota" current-name-doi="10.1601/nm.31614" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="NVP" />
          </name-status-group>
        </nomenclature>
        <ancestor doi="10.1601/tx.28469" rank="class">
          <nomenclature xmlns="http://namesforlife.com/ns/common">
            <name-status-group>
              <identifier doi="10.1601/nm.28469" nomenclatural-type="10.1601/tx.7764" nomenclatural-type-exemplar="10.1601/ex.7767" rank="class" taxon-doi="10.1601/tx.28469">Chlamydiia</identifier>
              <authority>(Cavalier-Smith 2002) Horn 2016 emend. Gupta et al. 2015</authority>
              <status candidatus="false" conserved="false" current-name="Chlamydiia" current-name-doi="10.1601/nm.28469" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
            </name-status-group>
          </nomenclature>
          <ancestor doi="10.1601/tx.28486" rank="order">
            <nomenclature xmlns="http://namesforlife.com/ns/common">
              <name-status-group>
                <identifier doi="10.1601/nm.28486" nomenclatural-type="10.1601/tx.7781" nomenclatural-type-exemplar="10.1601/ex.7782" rank="order" taxon-doi="10.1601/tx.28486">Parachlamydiales</identifier>
                <authority>Gupta et al. 2016</authority>
                <status candidatus="false" conserved="false" current-name="Parachlamydiales" current-name-doi="10.1601/nm.28486" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
              </name-status-group>
            </nomenclature>
            <ancestor doi="10.1601/tx.7790" rank="family">
              <nomenclature xmlns="http://namesforlife.com/ns/common">
                <name-status-group>
                  <identifier doi="10.1601/nm.7790" nomenclatural-type="10.1601/tx.7791" nomenclatural-type-exemplar="10.1601/ex.7792" rank="family" taxon-doi="10.1601/tx.7790">Waddliaceae</identifier>
                  <authority>Rurangirwa et al. 1999</authority>
                  <status candidatus="false" conserved="false" current-name="Waddliaceae" current-name-doi="10.1601/nm.7790" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                </name-status-group>
              </nomenclature>
              <ancestor doi="10.1601/tx.7791" rank="genus">
                <nomenclature xmlns="http://namesforlife.com/ns/common">
                  <name-status-group>
                    <identifier doi="10.1601/nm.7791" nomenclatural-type="10.1601/tx.7792" nomenclatural-type-exemplar="10.1601/ex.7792" rank="genus" taxon-doi="10.1601/tx.7791">Waddlia</identifier>
                    <authority>Rurangirwa et al. 1999</authority>
                    <status candidatus="false" conserved="false" current-name="Waddlia" current-name-doi="10.1601/nm.7791" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                  </name-status-group>
                </nomenclature>
                <ancestor doi="10.1601/tx.7792" rank="species">
                  <nomenclature xmlns="http://namesforlife.com/ns/common">
                    <name-status-group>
                      <identifier doi="10.1601/nm.7792" nomenclatural-type-exemplar="10.1601/ex.7792" rank="species" taxon-doi="10.1601/tx.7792">Waddlia chondrophila</identifier>
                      <authority>Rurangirwa et al. 1999 emend. García-López et al. 2019</authority>
                      <status candidatus="false" conserved="false" current-name="Waddlia chondrophila" current-name-doi="10.1601/nm.7792" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                    </name-status-group>
                  </nomenclature>
                </ancestor>
              </ancestor>
            </ancestor>
          </ancestor>
        </ancestor>
      </ancestor>
    </ancestor>
  </ancestor>
  <parent doi="10.1601/tx.7791" rank="genus">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.7791" nomenclatural-type="10.1601/tx.7792" nomenclatural-type-exemplar="10.1601/ex.7792" rank="genus" taxon-doi="10.1601/tx.7791">Waddlia</identifier>
        <authority>Rurangirwa et al. 1999</authority>
        <status candidatus="false" conserved="false" current-name="Waddlia" current-name-doi="10.1601/nm.7791" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </parent>
  <exemplars xmlns="http://namesforlife.com/ns/exemplar">
    <exemplar doi="10.1601/ex.19360" is-uncultivated="false">
      <identifiers>
        <identifier is-laboratory-identifier="true" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="2032/99" source="gold" />
      </identifiers>
      <features>
        <feature code="10.1601.fr.GCAT" description="Genome Catalogue Identifier" id="007755_GCAT" source="gold" />
        <feature code="10.1601.fr.gold" description="GOLD Card" id="Gi06675" source="gold" />
      </features>
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.7792" nomenclatural-type-exemplar="10.1601/ex.7792" rank="species" taxon-doi="10.1601/tx.7792">Waddlia chondrophila</identifier>
          <authority>Rurangirwa et al. 1999 emend. García-López et al. 2019</authority>
          <status candidatus="false" conserved="false" current-name="Waddlia chondrophila" current-name-doi="10.1601/nm.7792" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
      </nomenclature>
      <bibliography xmlns="http://namesforlife.com/ns/reference">
        <reference id="rid.12444">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Liolios</surname>
                <given-names>K.</given-names>
              </person-name>
              <person-name>
                <surname>Chen</surname>
                <given-names>I.M.</given-names>
              </person-name>
              <person-name>
                <surname>Mavromatis</surname>
                <given-names>K.</given-names>
              </person-name>
              <person-name>
                <surname>Tavernarakis</surname>
                <given-names>N.</given-names>
              </person-name>
              <person-name>
                <surname>Hugenholtz</surname>
                <given-names>P.</given-names>
              </person-name>
              <person-name>
                <surname>Markowitz</surname>
                <given-names>V.M.</given-names>
              </person-name>
              <person-name>
                <surname>Kyrpides</surname>
                <given-names>N.C.</given-names>
              </person-name>
            </authors>
            <article-title>The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata</article-title>
            <year>2010</year>
            <volume>38</volume>
            <fpage>D346</fpage>
            <lpage>354</lpage>
            <source id="1178">Nucleic Acids Research</source>
            <abbrev>Nucleic Acids Res.</abbrev>
            <issn>0305-1048</issn>
            <essn>1362-4962</essn>
            <pub-id pub-id-type="doi">10.1093/nar/gkp848</pub-id>
            <pub-id pub-id-type="pmid">19914934</pub-id>
          </citation>
        </reference>
      </bibliography>
      <annotation xmlns="http://namesforlife.com/ns/common">
        <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="17:19:04" time-formatted="17:19 PM" />
        <modified curator="Charles Parker" date="2020-03-12" date-formatted="March 12, 2020" time="00:17:02" time-formatted="0:17 AM" />
        <created curator="Dorothea Rohlfs" date="2010-06-28" date-formatted="June 28, 2010" time="09:15:10" time-formatted="9:15 AM" />
      </annotation>
    </exemplar>
    <exemplar doi="10.1601/ex.7792" is-uncultivated="false">
      <biosafety-level code="BSL-2" description="BioSafety Level 2" />
      <identifiers>
        <identifier is-laboratory-identifier="true" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="WSU 86-1044" reference="rid.7442" source="reference" />
        <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="ATCC VR-1470" reference="rid.7442" source="reference" />
      </identifiers>
      <features>
        <feature code="10.1601.fr.16S" description="16S gene" id="AF042496#{1-1557}" reference="rid.7442" source="reference" url="https://www.ncbi.nlm.nih.gov/nuccore/AF042496" />
        <feature code="10.1601.fr.sample" description="NCBI BioSample" id="SAMN02603402" reference="rid.21691" source="reference" />
        <feature code="10.1601.fr.GCAT" description="Genome Catalogue Identifier" id="007237_GCAT" source="gold" />
        <feature code="10.1601.fr.gold" description="GOLD Card" id="Gc01300" source="gold" />
        <feature code="10.1601.fr.chromosome" description="Chromosome" id="CP001928" reference="rid.18295" source="reference" />
      </features>
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.7792" nomenclatural-type-exemplar="10.1601/ex.7792" rank="species" taxon-doi="10.1601/tx.7792">Waddlia chondrophila</identifier>
          <authority>Rurangirwa et al. 1999 emend. García-López et al. 2019</authority>
          <status candidatus="false" conserved="false" current-name="Waddlia chondrophila" current-name-doi="10.1601/nm.7792" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
      </nomenclature>
      <bibliography xmlns="http://namesforlife.com/ns/reference">
        <reference id="rid.21691">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>García-López</surname>
                <given-names>M.</given-names>
              </person-name>
              <person-name>
                <surname>Meier-Kolthoff</surname>
                <given-names>J.P.</given-names>
              </person-name>
              <person-name>
                <surname>Tindall</surname>
                <given-names>B.J.</given-names>
              </person-name>
              <person-name>
                <surname>Gronow</surname>
                <given-names>S.</given-names>
              </person-name>
              <person-name>
                <surname>Woyke</surname>
                <given-names>T.</given-names>
              </person-name>
              <person-name>
                <surname>Kyrpides</surname>
                <given-names>N.C.</given-names>
              </person-name>
              <person-name>
                <surname>Hahnke</surname>
                <given-names>R.L.</given-names>
              </person-name>
              <person-name>
                <surname>Göker</surname>
                <given-names>M.</given-names>
              </person-name>
            </authors>
            <article-title>Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.</article-title>
            <year>2019</year>
            <volume>10</volume>
            <fpage>2083</fpage>
            <lpage>2083</lpage>
            <source id="1354">Frontiers in Microbiology</source>
            <abbrev>Front. Microbio.</abbrev>
            <essn>1664-302X</essn>
            <pub-id pub-id-type="doi">10.3389/fmicb.2019.02083</pub-id>
            <pub-id pub-id-type="pmid">31608019</pub-id>
          </citation>
        </reference>
        <reference id="rid.7442">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Rurangirwa</surname>
                <given-names>F.R.</given-names>
              </person-name>
              <person-name>
                <surname>Dilbeck</surname>
                <given-names>P.M.</given-names>
              </person-name>
              <person-name>
                <surname>Crawford</surname>
                <given-names>T.B.</given-names>
              </person-name>
              <person-name>
                <surname>McGuire</surname>
                <given-names>T.C.</given-names>
              </person-name>
              <person-name>
                <surname>McElwain</surname>
                <given-names>T.F.</given-names>
              </person-name>
            </authors>
            <article-title>Analysis of the 16S rRNA gene of micro-organism WSU 86-1044 from an aborted bovine foetus reveals that it is a member of the order Chlamydiales: proposal of Waddliaceae fam. nov., Waddlia chondrophila gen. nov., sp. nov.</article-title>
            <year>1999</year>
            <volume>49</volume>
            <issue>2</issue>
            <fpage>577</fpage>
            <lpage>581</lpage>
            <source id="116">International Journal of Systematic Bacteriology</source>
            <abbrev>Int J Syst Bacteriol</abbrev>
            <issn>0020-7713</issn>
            <pub-id pub-id-type="doi">10.1099/00207713-49-2-577</pub-id>
            <pub-id pub-id-type="pmid">10319478</pub-id>
          </citation>
        </reference>
        <reference id="rid.18295">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Bertelli</surname>
                <given-names>C.</given-names>
              </person-name>
              <person-name>
                <surname>Collyn</surname>
                <given-names>F.</given-names>
              </person-name>
              <person-name>
                <surname>Croxatto</surname>
                <given-names>A.</given-names>
              </person-name>
              <person-name>
                <surname>Rückert</surname>
                <given-names>C.</given-names>
              </person-name>
              <person-name>
                <surname>Polkinghorne</surname>
                <given-names>A.</given-names>
              </person-name>
              <person-name>
                <surname>Kebbi-Beghdadi</surname>
                <given-names>C.</given-names>
              </person-name>
              <person-name>
                <surname>Goesmann</surname>
                <given-names>A.</given-names>
              </person-name>
              <person-name>
                <surname>Vaughan</surname>
                <given-names>L.</given-names>
              </person-name>
              <person-name>
                <surname>Greub</surname>
                <given-names>G.</given-names>
              </person-name>
            </authors>
            <article-title>The Waddlia genome: a window into chlamydial biology</article-title>
            <year>2010</year>
            <volume>5</volume>
            <issue>5</issue>
            <fpage>e10890</fpage>
            <lpage>e10890</lpage>
            <source id="1163">PLoS One</source>
            <essn>1932-6203</essn>
            <pub-id pub-id-type="doi">10.1371/journal.pone.0010890</pub-id>
            <pub-id pub-id-type="pmid">20531937</pub-id>
          </citation>
        </reference>
        <reference id="rid.12444">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Liolios</surname>
                <given-names>K.</given-names>
              </person-name>
              <person-name>
                <surname>Chen</surname>
                <given-names>I.M.</given-names>
              </person-name>
              <person-name>
                <surname>Mavromatis</surname>
                <given-names>K.</given-names>
              </person-name>
              <person-name>
                <surname>Tavernarakis</surname>
                <given-names>N.</given-names>
              </person-name>
              <person-name>
                <surname>Hugenholtz</surname>
                <given-names>P.</given-names>
              </person-name>
              <person-name>
                <surname>Markowitz</surname>
                <given-names>V.M.</given-names>
              </person-name>
              <person-name>
                <surname>Kyrpides</surname>
                <given-names>N.C.</given-names>
              </person-name>
            </authors>
            <article-title>The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata</article-title>
            <year>2010</year>
            <volume>38</volume>
            <fpage>D346</fpage>
            <lpage>354</lpage>
            <source id="1178">Nucleic Acids Research</source>
            <abbrev>Nucleic Acids Res.</abbrev>
            <issn>0305-1048</issn>
            <essn>1362-4962</essn>
            <pub-id pub-id-type="doi">10.1093/nar/gkp848</pub-id>
            <pub-id pub-id-type="pmid">19914934</pub-id>
          </citation>
        </reference>
      </bibliography>
      <annotation xmlns="http://namesforlife.com/ns/common">
        <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="17:19:04" time-formatted="17:19 PM" />
        <modified curator="Charles Parker" date="2020-03-17" date-formatted="March 17, 2020" time="14:55:15" time-formatted="14:55 PM" />
        <created curator="Dorothea Rohlfs" date="2009-10-22" date-formatted="October 22, 2009" time="15:12:38" time-formatted="15:12 PM" />
      </annotation>
    </exemplar>
  </exemplars>
  <bibliography xmlns="http://namesforlife.com/ns/reference">
    <reference id="rid.7442">
      <citation citation-type="journal">
        <authors>
          <person-name>
            <surname>Rurangirwa</surname>
            <given-names>F.R.</given-names>
          </person-name>
          <person-name>
            <surname>Dilbeck</surname>
            <given-names>P.M.</given-names>
          </person-name>
          <person-name>
            <surname>Crawford</surname>
            <given-names>T.B.</given-names>
          </person-name>
          <person-name>
            <surname>McGuire</surname>
            <given-names>T.C.</given-names>
          </person-name>
          <person-name>
            <surname>McElwain</surname>
            <given-names>T.F.</given-names>
          </person-name>
        </authors>
        <article-title>Analysis of the 16S rRNA gene of micro-organism WSU 86-1044 from an aborted bovine foetus reveals that it is a member of the order Chlamydiales: proposal of Waddliaceae fam. nov., Waddlia chondrophila gen. nov., sp. nov.</article-title>
        <year>1999</year>
        <volume>49</volume>
        <issue>2</issue>
        <fpage>577</fpage>
        <lpage>581</lpage>
        <source id="116">International Journal of Systematic Bacteriology</source>
        <abbrev>Int J Syst Bacteriol</abbrev>
        <issn>0020-7713</issn>
        <pub-id pub-id-type="doi">10.1099/00207713-49-2-577</pub-id>
        <pub-id pub-id-type="pmid">10319478</pub-id>
      </citation>
    </reference>
  </bibliography>
  <annotation xmlns="http://namesforlife.com/ns/common">
    <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="17:19:04" time-formatted="17:19 PM" />
    <modified curator="Charles Parker" date="2020-03-17" date-formatted="March 17, 2020" time="14:55:08" time-formatted="14:55 PM" />
    <created curator="Dorothea Rohlfs" date="2010-06-28" date-formatted="June 28, 2010" time="09:15:19" time-formatted="9:15 AM" />
  </annotation>
</taxon>
