<?xml version="1.0" ?>
<!--
  (c) 2024, The Regents of the University of California, through Lawrence Berkeley National Laboratory (subject to receipt of any required approvals from the U.S. Dept. of Energy).
  All rights reserved.

  CLOCKSS system has permission to ingest, preserve, and serve this Archival Unit.
  LOCKSS system has permission to ingest, preserve, and serve this Archival Unit.

  This content is licensed under a Creative Commons Attribution 3.0 International license: https://creativecommons.org/licenses/by/3.0/
-->
<taxon doi="10.1601/tx.8029" rank="species" xmlns="http://namesforlife.com/ns/taxon">
  <nomenclature xmlns="http://namesforlife.com/ns/common">
    <name-status-group>
      <identifier doi="10.1601/nm.8029" nomenclatural-type-exemplar="10.1601/ex.7953" rank="species" taxon-doi="10.1601/tx.8029">Porphyromonas gingivalis</identifier>
      <authority>(Coykendall et al. 1980) Shah and Collins 1988 emend. Hahnke et al. 2016</authority>
      <status candidatus="false" conserved="false" current-name="Porphyromonas gingivalis" current-name-doi="10.1601/nm.8029" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
    </name-status-group>
  </nomenclature>
  <nomenclatural-type nomenclatural-type-exemplar="10.1601/ex.7953" xmlns="http://namesforlife.com/ns/common" />
  <taxonomic-equivalence>
    <related-taxon accession="837" nomos="NCBI Taxonomy" rank="species" relation="exactMatch" />
  </taxonomic-equivalence>
  <ancestor doi="10.1601/tx.0" rank="root">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.0" rank="root" taxon-doi="10.1601/tx.0">Universal Root</identifier>
        <authority>Woese et al. 1990</authority>
        <status candidatus="false" conserved="false" current-name="Universal Root" current-name-doi="10.1601/nm.0" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
    <ancestor doi="10.1601/tx.419" rank="domain">
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.419" rank="domain" taxon-doi="10.1601/tx.419">Bacteria</identifier>
          <authority>(None 2015) Woese et al. 1990</authority>
          <status candidatus="false" conserved="false" current-name="Bacteria" current-name-doi="10.1601/nm.419" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
        </name-status-group>
      </nomenclature>
      <ancestor doi="10.1601/tx.7927" rank="phylum">
        <nomenclature xmlns="http://namesforlife.com/ns/common">
          <name-status-group>
            <identifier doi="10.1601/nm.31612" nomenclatural-type="10.1601/tx.7931" nomenclatural-type-exemplar="10.1601/ex.7932" rank="phylum" taxon-doi="10.1601/tx.7927">Bacteroidota</identifier>
            <authority>corrig. Krieg et al. 2021</authority>
            <status candidatus="false" conserved="false" current-name="Bacteroidota" current-name-doi="10.1601/nm.31612" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
          </name-status-group>
          <name-status-group>
            <identifier doi="10.1601/nm.7927" nomenclatural-type="10.1601/tx.7931" nomenclatural-type-exemplar="10.1601/ex.7932" rank="phylum" taxon-doi="10.1601/tx.7927">Bacteroidetes</identifier>
            <authority>(sic) Krieg et al. 2021 non Bacteroidetes Krieg 2012</authority>
            <status candidatus="false" conserved="false" current-name="Bacteroidota" current-name-doi="10.1601/nm.31612" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="NVP" />
          </name-status-group>
        </nomenclature>
        <ancestor doi="10.1601/tx.7928" rank="class">
          <nomenclature xmlns="http://namesforlife.com/ns/common">
            <name-status-group>
              <identifier doi="10.1601/nm.14398" nomenclatural-type="10.1601/tx.7929" nomenclatural-type-exemplar="10.1601/ex.7932" rank="class" taxon-doi="10.1601/tx.7928">Bacteroidia</identifier>
              <authority>corrig. Krieg 2012 emend. García-López et al. 2019</authority>
              <status candidatus="false" conserved="false" current-name="Bacteroidia" current-name-doi="10.1601/nm.14398" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
            </name-status-group>
            <name-status-group>
              <identifier doi="10.1601/nm.7928" nomenclatural-type="10.1601/tx.7929" nomenclatural-type-exemplar="10.1601/ex.7932" rank="class" taxon-doi="10.1601/tx.7928">Bacteroidetes</identifier>
              <authority>(sic) Krieg 2012 emend. García-López et al. 2019 non Bacteroidetes Krieg et al. 2021</authority>
              <status candidatus="false" conserved="false" current-name="Bacteroidia" current-name-doi="10.1601/nm.14398" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="VP" />
            </name-status-group>
          </nomenclature>
          <ancestor doi="10.1601/tx.7929" rank="order">
            <nomenclature xmlns="http://namesforlife.com/ns/common">
              <name-status-group>
                <identifier doi="10.1601/nm.7929" nomenclatural-type="10.1601/tx.7931" nomenclatural-type-exemplar="10.1601/ex.7932" rank="order" taxon-doi="10.1601/tx.7929">Bacteroidales</identifier>
                <authority>Krieg 2012 emend. García-López et al. 2019</authority>
                <status candidatus="false" conserved="false" current-name="Bacteroidales" current-name-doi="10.1601/nm.7929" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
              </name-status-group>
            </nomenclature>
            <ancestor doi="10.1601/tx.8019" rank="family">
              <nomenclature xmlns="http://namesforlife.com/ns/common">
                <name-status-group>
                  <identifier doi="10.1601/nm.8019" nomenclatural-type="10.1601/tx.8020" nomenclatural-type-exemplar="10.1601/ex.7935" rank="family" taxon-doi="10.1601/tx.8019">Porphyromonadaceae</identifier>
                  <authority>Krieg 2012 emend. Ormerod et al. 2016</authority>
                  <status candidatus="false" conserved="false" current-name="Porphyromonadaceae" current-name-doi="10.1601/nm.8019" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                </name-status-group>
              </nomenclature>
              <ancestor doi="10.1601/tx.8020" rank="genus">
                <nomenclature xmlns="http://namesforlife.com/ns/common">
                  <name-status-group>
                    <identifier doi="10.1601/nm.8020" nomenclatural-type="10.1601/tx.8021" nomenclatural-type-exemplar="10.1601/ex.7935" rank="genus" taxon-doi="10.1601/tx.8020">Porphyromonas</identifier>
                    <authority>Shah and Collins 1988 emend. Kawamura et al. 2015</authority>
                    <status candidatus="false" conserved="false" current-name="Porphyromonas" current-name-doi="10.1601/nm.8020" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                  </name-status-group>
                </nomenclature>
                <ancestor doi="10.1601/tx.8029" rank="species">
                  <nomenclature xmlns="http://namesforlife.com/ns/common">
                    <name-status-group>
                      <identifier doi="10.1601/nm.8029" nomenclatural-type-exemplar="10.1601/ex.7953" rank="species" taxon-doi="10.1601/tx.8029">Porphyromonas gingivalis</identifier>
                      <authority>(Coykendall et al. 1980) Shah and Collins 1988 emend. Hahnke et al. 2016</authority>
                      <status candidatus="false" conserved="false" current-name="Porphyromonas gingivalis" current-name-doi="10.1601/nm.8029" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                    </name-status-group>
                  </nomenclature>
                </ancestor>
              </ancestor>
            </ancestor>
          </ancestor>
        </ancestor>
      </ancestor>
    </ancestor>
  </ancestor>
  <parent doi="10.1601/tx.8020" rank="genus">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8020" nomenclatural-type="10.1601/tx.8021" nomenclatural-type-exemplar="10.1601/ex.7935" rank="genus" taxon-doi="10.1601/tx.8020">Porphyromonas</identifier>
        <authority>Shah and Collins 1988 emend. Kawamura et al. 2015</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas" current-name-doi="10.1601/nm.8020" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </parent>
  <sibling doi="10.1601/tx.8033" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8033" nomenclatural-type-exemplar="10.1601/ex.7964" rank="species" taxon-doi="10.1601/tx.8033">Porphyromonas macacae</identifier>
        <authority>(Slots and Genco 1980) Love 1995</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas macacae" current-name-doi="10.1601/nm.8033" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8022" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8022" nomenclatural-type-exemplar="10.1601/ex.8022" rank="species" taxon-doi="10.1601/tx.8022">Porphyromonas cangingivalis</identifier>
        <authority>Collins et al. 1994 emend. García-López et al. 2019</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas cangingivalis" current-name-doi="10.1601/nm.8022" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8034" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8034" nomenclatural-type-exemplar="10.1601/ex.7983" rank="species" taxon-doi="10.1601/tx.8034">Porphyromonas salivosa</identifier>
        <authority>(Love et al. 1987) Love et al. 1992</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas salivosa" current-name-doi="10.1601/nm.8034" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8024" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8024" nomenclatural-type-exemplar="10.1601/ex.8024" rank="species" taxon-doi="10.1601/tx.8024">Porphyromonas cansulci</identifier>
        <authority>Collins et al. 1994 emend. García-López et al. 2019</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas cansulci" current-name-doi="10.1601/nm.8024" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.9296" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.9296" nomenclatural-type-exemplar="10.1601/ex.9296" rank="species" taxon-doi="10.1601/tx.9296">Porphyromonas uenonis</identifier>
        <authority>Finegold et al. 2005</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas uenonis" current-name-doi="10.1601/nm.9296" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8030" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8030" nomenclatural-type-exemplar="10.1601/ex.8030" rank="species" taxon-doi="10.1601/tx.8030">Porphyromonas gingivicanis</identifier>
        <authority>Hirasawa and Takada 1994 emend. García-López et al. 2019</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas gingivicanis" current-name-doi="10.1601/nm.8030" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8021" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8021" nomenclatural-type-exemplar="10.1601/ex.7935" rank="species" taxon-doi="10.1601/tx.8021">Porphyromonas asaccharolytica</identifier>
        <authority>(Holdeman and Moore 1970) Shah and Collins 1988 emend. Hahnke et al. 2016</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas asaccharolytica" current-name-doi="10.1601/nm.8021" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.27069" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.27069" nomenclatural-type-exemplar="10.1601/ex.27069" rank="species" taxon-doi="10.1601/tx.27069">Porphyromonas pasteri</identifier>
        <authority>Sakamoto et al. 2015</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas pasteri" current-name-doi="10.1601/nm.27069" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8028" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8028" nomenclatural-type-exemplar="10.1601/ex.7949" rank="species" taxon-doi="10.1601/tx.8028">Porphyromonas endodontalis</identifier>
        <authority>(van Steenbergen et al. 1984) Shah and Collins 1988 emend. Hahnke et al. 2016</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas endodontalis" current-name-doi="10.1601/nm.8028" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8032" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8032" nomenclatural-type-exemplar="10.1601/ex.7959" rank="species" taxon-doi="10.1601/tx.8032">Porphyromonas levii</identifier>
        <authority>(Johnson and Holdeman 1983) Shah et al. 1995 emend. Hahnke et al. 2016</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas levii" current-name-doi="10.1601/nm.8032" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8031" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8031" nomenclatural-type-exemplar="10.1601/ex.8031" rank="species" taxon-doi="10.1601/tx.8031">Porphyromonas gulae</identifier>
        <authority>Fournier et al. 2001 emend. Hahnke et al. 2016</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas gulae" current-name-doi="10.1601/nm.8031" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8023" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8023" nomenclatural-type-exemplar="10.1601/ex.8023" rank="species" taxon-doi="10.1601/tx.8023">Porphyromonas canoris</identifier>
        <authority>Love et al. 1994</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas canoris" current-name-doi="10.1601/nm.8023" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.10077" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.10077" nomenclatural-type-exemplar="10.1601/ex.10077" rank="species" taxon-doi="10.1601/tx.10077">Porphyromonas somerae</identifier>
        <authority>Summanen et al. 2006 emend. Hahnke et al. 2016</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas somerae" current-name-doi="10.1601/nm.10077" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8026" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8026" nomenclatural-type-exemplar="10.1601/ex.8026" rank="species" taxon-doi="10.1601/tx.8026">Porphyromonas circumdentaria</identifier>
        <authority>Love et al. 1992 emend. García-López et al. 2019</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas circumdentaria" current-name-doi="10.1601/nm.8026" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8025" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8025" nomenclatural-type-exemplar="10.1601/ex.8025" rank="species" taxon-doi="10.1601/tx.8025">Porphyromonas catoniae</identifier>
        <authority>(Moore and Moore 1994) Willems and Collins 1995 emend. Hahnke et al. 2016</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas catoniae" current-name-doi="10.1601/nm.8025" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.8027" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.8027" nomenclatural-type-exemplar="10.1601/ex.8027" rank="species" taxon-doi="10.1601/tx.8027">Porphyromonas crevioricanis</identifier>
        <authority>Hirasawa and Takada 1994 emend. García-López et al. 2019</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas crevioricanis" current-name-doi="10.1601/nm.8027" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.14512" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.14512" nomenclatural-type-exemplar="10.1601/ex.14512" rank="species" taxon-doi="10.1601/tx.14512">Porphyromonas bennonis</identifier>
        <authority>Summanen et al. 2009 emend. Hahnke et al. 2016</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas bennonis" current-name-doi="10.1601/nm.14512" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.17587" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.17587" rank="species" taxon-doi="10.1601/tx.17587">Porphyromonas sp.</identifier>
        <authority>None 2015</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas sp." current-name-doi="10.1601/nm.17587" illegitimate="true" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.29214" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.29214" nomenclatural-type-exemplar="10.1601/ex.29214" rank="species" taxon-doi="10.1601/tx.29214">Porphyromonas loveana</identifier>
        <authority>Bird et al. 2016</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas loveana" current-name-doi="10.1601/nm.29214" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.26797" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.26797" nomenclatural-type-exemplar="10.1601/ex.26797" rank="species" taxon-doi="10.1601/tx.26797">Porphyromonas pogonae</identifier>
        <authority>Kawamura et al. 2015</authority>
        <status candidatus="false" conserved="false" current-name="Porphyromonas pogonae" current-name-doi="10.1601/nm.26797" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <exemplars xmlns="http://namesforlife.com/ns/exemplar">
    <exemplar doi="10.1601/ex.29330" is-uncultivated="false">
      <identifiers>
        <identifier is-laboratory-identifier="true" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="TDC60" reference="rid.12821" source="reference" />
      </identifiers>
      <features>
        <feature code="10.1601.fr.gold" description="GOLD Card" id="Gc01800" source="gold" />
        <feature code="10.1601.fr.gold" description="GOLD Card" id="Gp0011184" source="gold" />
        <feature code="10.1601.fr.chromosome" description="Chromosome" id="AP012203" reference="rid.12821" source="reference" />
      </features>
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.8029" nomenclatural-type-exemplar="10.1601/ex.7953" rank="species" taxon-doi="10.1601/tx.8029">Porphyromonas gingivalis</identifier>
          <authority>(Coykendall et al. 1980) Shah and Collins 1988 emend. Hahnke et al. 2016</authority>
          <status candidatus="false" conserved="false" current-name="Porphyromonas gingivalis" current-name-doi="10.1601/nm.8029" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
      </nomenclature>
      <bibliography xmlns="http://namesforlife.com/ns/reference">
        <reference id="rid.12821">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Garrity</surname>
                <given-names>G.M.</given-names>
              </person-name>
              <person-name>
                <surname>Nelson</surname>
                <given-names>O.W.</given-names>
              </person-name>
            </authors>
            <article-title>Genome sequences of Bacteria and Archaea published outside of Standards in Genomic Sciences, June - September 2011</article-title>
            <year>2011</year>
            <volume>5</volume>
            <issue>1</issue>
            <fpage>154</fpage>
            <lpage>167</lpage>
            <source id="1183">Standards in Genomic Sciences</source>
            <abbrev>Stand Genomic Sci</abbrev>
            <issn>1944-3277</issn>
            <pub-id pub-id-type="doi">10.4056/sigs.2324675</pub-id>
          </citation>
        </reference>
        <reference id="rid.12444">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Liolios</surname>
                <given-names>K.</given-names>
              </person-name>
              <person-name>
                <surname>Chen</surname>
                <given-names>I.M.</given-names>
              </person-name>
              <person-name>
                <surname>Mavromatis</surname>
                <given-names>K.</given-names>
              </person-name>
              <person-name>
                <surname>Tavernarakis</surname>
                <given-names>N.</given-names>
              </person-name>
              <person-name>
                <surname>Hugenholtz</surname>
                <given-names>P.</given-names>
              </person-name>
              <person-name>
                <surname>Markowitz</surname>
                <given-names>V.M.</given-names>
              </person-name>
              <person-name>
                <surname>Kyrpides</surname>
                <given-names>N.C.</given-names>
              </person-name>
            </authors>
            <article-title>The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata</article-title>
            <year>2010</year>
            <volume>38</volume>
            <fpage>D346</fpage>
            <lpage>354</lpage>
            <source id="1178">Nucleic Acids Research</source>
            <abbrev>Nucleic Acids Res.</abbrev>
            <issn>0305-1048</issn>
            <essn>1362-4962</essn>
            <pub-id pub-id-type="doi">10.1093/nar/gkp848</pub-id>
            <pub-id pub-id-type="pmid">19914934</pub-id>
          </citation>
        </reference>
      </bibliography>
      <annotation xmlns="http://namesforlife.com/ns/common">
        <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="17:22:39" time-formatted="17:22 PM" />
        <modified curator="NamesforLife Curator" date="2016-09-19" date-formatted="September 19, 2016" time="18:55:27" time-formatted="18:55 PM" />
        <created curator="NamesforLife Curator" date="2016-09-19" date-formatted="September 19, 2016" time="18:54:59" time-formatted="18:54 PM" />
      </annotation>
    </exemplar>
    <exemplar doi="10.1601/ex.16125" is-uncultivated="false">
      <identifiers>
        <identifier is-laboratory-identifier="true" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="W83" reference="rid.10297" source="reference" />
        <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="HG66" reference="rid.10297" source="reference" />
        <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="ATCC BAA-308" source="gold" />
      </identifiers>
      <features>
        <feature code="10.1601.fr.chromosome" description="Chromosome" id="NC_002950" source="genbank" />
      </features>
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.8029" nomenclatural-type-exemplar="10.1601/ex.7953" rank="species" taxon-doi="10.1601/tx.8029">Porphyromonas gingivalis</identifier>
          <authority>(Coykendall et al. 1980) Shah and Collins 1988 emend. Hahnke et al. 2016</authority>
          <status candidatus="false" conserved="false" current-name="Porphyromonas gingivalis" current-name-doi="10.1601/nm.8029" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
      </nomenclature>
      <bibliography xmlns="http://namesforlife.com/ns/reference">
        <reference id="rid.10297">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Nelson</surname>
                <given-names>K.E.</given-names>
              </person-name>
              <person-name>
                <surname>Fleischmann</surname>
                <given-names>R.D.</given-names>
              </person-name>
              <person-name>
                <surname>DeBoy</surname>
                <given-names>R.T.</given-names>
              </person-name>
              <person-name>
                <surname>Paulsen</surname>
                <given-names>I.T.</given-names>
              </person-name>
              <person-name>
                <surname>Fouts</surname>
                <given-names>D.E.</given-names>
              </person-name>
              <person-name>
                <surname>Eisen</surname>
                <given-names>J.A.</given-names>
              </person-name>
              <person-name>
                <surname>Daugherty</surname>
                <given-names>S.C.</given-names>
              </person-name>
              <person-name>
                <surname>Dodson</surname>
                <given-names>R.J.</given-names>
              </person-name>
              <person-name>
                <surname>Durkin</surname>
                <given-names>A.S.</given-names>
              </person-name>
              <person-name>
                <surname>Gwinn</surname>
                <given-names>M.</given-names>
              </person-name>
              <person-name>
                <surname>Haft</surname>
                <given-names>D.H.</given-names>
              </person-name>
              <person-name>
                <surname>Kolonay</surname>
                <given-names>J.F.</given-names>
              </person-name>
              <person-name>
                <surname>Nelson</surname>
                <given-names>W.C.</given-names>
              </person-name>
              <person-name>
                <surname>Mason</surname>
                <given-names>T.</given-names>
              </person-name>
              <person-name>
                <surname>Tallon</surname>
                <given-names>L.</given-names>
              </person-name>
              <person-name>
                <surname>Gray</surname>
                <given-names>J.</given-names>
              </person-name>
              <person-name>
                <surname>Granger</surname>
                <given-names>D.</given-names>
              </person-name>
              <person-name>
                <surname>Tettelin</surname>
                <given-names>H.</given-names>
              </person-name>
              <person-name>
                <surname>Dong</surname>
                <given-names>H.</given-names>
              </person-name>
              <person-name>
                <surname>Galvin</surname>
                <given-names>J.L.</given-names>
              </person-name>
              <person-name>
                <surname>Duncan</surname>
                <given-names>M.J.</given-names>
              </person-name>
              <person-name>
                <surname>Dewhirst</surname>
                <given-names>F.E.</given-names>
              </person-name>
              <person-name>
                <surname>Fraser</surname>
                <given-names>C.M.</given-names>
              </person-name>
            </authors>
            <article-title>Complete genome sequence of the oral pathogenic Bacterium porphyromonas gingivalis strain W83</article-title>
            <year>2003</year>
            <volume>185</volume>
            <fpage>5591</fpage>
            <lpage>5601</lpage>
            <source id="177">Journal of Bacteriology</source>
            <abbrev>J Bacteriol</abbrev>
            <issn>0021-9193</issn>
            <essn>1098-5530</essn>
            <pub-id pub-id-type="doi">10.1128/JB.185.18.5591-5601.2003</pub-id>
            <pub-id pub-id-type="pmid">12949112</pub-id>
          </citation>
        </reference>
      </bibliography>
      <annotation xmlns="http://namesforlife.com/ns/common">
        <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="17:22:39" time-formatted="17:22 PM" />
        <modified curator="NamesforLife Curator" date="2016-07-15" date-formatted="July 15, 2016" time="19:43:10" time-formatted="19:43 PM" />
        <created curator="Dorothea Rohlfs" date="2010-02-01" date-formatted="February 1, 2010" time="16:20:31" time-formatted="16:20 PM" />
      </annotation>
    </exemplar>
    <exemplar doi="10.1601/ex.7953" is-uncultivated="false">
      <biosafety-level code="BSL-2" description="BioSafety Level 2" />
      <identifiers>
        <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="DSM 20709" source="dsmz" />
        <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="Slots 2561" reference="rid.1321" source="reference" />
        <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="ATCC 33277" reference="rid.1330" source="reference" />
      </identifiers>
      <features>
        <feature code="10.1601.fr.16S" description="16S gene" id="AB035459#(partial)" source="genbank" url="https://www.ncbi.nlm.nih.gov/nuccore/AB035459" />
        <feature code="10.1601.fr.16S" description="16S gene" id="AB035457" source="genbank" url="https://www.ncbi.nlm.nih.gov/nuccore/AB035457" />
        <feature code="10.1601.fr.16S" description="16S gene" id="L16492" reference="rid.9296" source="reference" url="https://www.ncbi.nlm.nih.gov/nuccore/L16492" />
      </features>
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.7953" nomenclatural-type-exemplar="10.1601/ex.7953" rank="species" taxon-doi="10.1601/tx.7953">Bacteroides gingivalis</identifier>
          <authority>Coykendall et al. 1980</authority>
          <status candidatus="false" conserved="false" current-name="Porphyromonas gingivalis" current-name-doi="10.1601/nm.8029" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
        <name-status-group>
          <identifier doi="10.1601/nm.8029" nomenclatural-type-exemplar="10.1601/ex.7953" rank="species" taxon-doi="10.1601/tx.8029">Porphyromonas gingivalis</identifier>
          <authority>(Coykendall et al. 1980) Shah and Collins 1988 emend. Hahnke et al. 2016</authority>
          <status candidatus="false" conserved="false" current-name="Porphyromonas gingivalis" current-name-doi="10.1601/nm.8029" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
      </nomenclature>
      <bibliography xmlns="http://namesforlife.com/ns/reference">
        <reference id="rid.1330">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Shah</surname>
                <given-names>H.N.</given-names>
              </person-name>
              <person-name>
                <surname>Collins</surname>
                <given-names>M.D.</given-names>
              </person-name>
            </authors>
            <article-title>Proposal for reclassification of Bacteroides asaccharolyticus, Bacteroides gingivalis, and Bacteroides endodontalis in a new genus, Porphyromonas.</article-title>
            <year>1988</year>
            <volume>38</volume>
            <issue>1</issue>
            <fpage>128</fpage>
            <lpage>131</lpage>
            <source id="116">International Journal of Systematic Bacteriology</source>
            <abbrev>Int J Syst Bacteriol</abbrev>
            <issn>0020-7713</issn>
            <pub-id pub-id-type="doi">10.1099/00207713-38-1-128</pub-id>
          </citation>
        </reference>
        <reference id="rid.1321">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Coykendall</surname>
                <given-names>A.L.</given-names>
              </person-name>
              <person-name>
                <surname>Kaczmarek</surname>
                <given-names>F.S.</given-names>
              </person-name>
              <person-name>
                <surname>Slots</surname>
                <given-names>J.</given-names>
              </person-name>
            </authors>
            <article-title>Genetic heterogeneity in Bacteroides asaccharolyticus (Holdeman and Moore 1980) Finegold and Barnes 1977 (Approved Lists, 1980) and proposal of Bacteroides gingivalis sp. nov. and Bacteroides macacae (Slots and Genco) comb. nov.</article-title>
            <year>1980</year>
            <volume>30</volume>
            <issue>3</issue>
            <fpage>559</fpage>
            <lpage>564</lpage>
            <source id="116">International Journal of Systematic Bacteriology</source>
            <abbrev>Int J Syst Bacteriol</abbrev>
            <issn>0020-7713</issn>
            <pub-id pub-id-type="doi">10.1099/00207713-30-3-559</pub-id>
          </citation>
        </reference>
        <reference id="rid.9296">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Paster</surname>
                <given-names>B.J.</given-names>
              </person-name>
              <person-name>
                <surname>Dewhirst</surname>
                <given-names>F.E.</given-names>
              </person-name>
              <person-name>
                <surname>Olsen</surname>
                <given-names>I.</given-names>
              </person-name>
              <person-name>
                <surname>Fraser</surname>
                <given-names>G.J.</given-names>
              </person-name>
            </authors>
            <article-title>Phylogeny of Bacteroides, Prevotella, and Porphyromonas spp. and related bacteria</article-title>
            <year>1994</year>
            <volume>176</volume>
            <fpage>725</fpage>
            <lpage>732</lpage>
            <source id="177">Journal of Bacteriology</source>
            <abbrev>J Bacteriol</abbrev>
            <issn>0021-9193</issn>
            <essn>1098-5530</essn>
            <pub-id pub-id-type="pmid">8300528</pub-id>
          </citation>
        </reference>
      </bibliography>
      <annotation xmlns="http://namesforlife.com/ns/common">
        <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="17:22:39" time-formatted="17:22 PM" />
        <modified curator="NamesforLife Curator" date="2016-07-15" date-formatted="July 15, 2016" time="19:41:45" time-formatted="19:41 PM" />
        <created curator="Dorothea Rohlfs" date="2009-11-05" date-formatted="November 5, 2009" time="11:26:57" time-formatted="11:26 AM" />
      </annotation>
    </exemplar>
  </exemplars>
  <bibliography xmlns="http://namesforlife.com/ns/reference">
    <reference id="rid.1330">
      <citation citation-type="journal">
        <authors>
          <person-name>
            <surname>Shah</surname>
            <given-names>H.N.</given-names>
          </person-name>
          <person-name>
            <surname>Collins</surname>
            <given-names>M.D.</given-names>
          </person-name>
        </authors>
        <article-title>Proposal for reclassification of Bacteroides asaccharolyticus, Bacteroides gingivalis, and Bacteroides endodontalis in a new genus, Porphyromonas.</article-title>
        <year>1988</year>
        <volume>38</volume>
        <issue>1</issue>
        <fpage>128</fpage>
        <lpage>131</lpage>
        <source id="116">International Journal of Systematic Bacteriology</source>
        <abbrev>Int J Syst Bacteriol</abbrev>
        <issn>0020-7713</issn>
        <pub-id pub-id-type="doi">10.1099/00207713-38-1-128</pub-id>
      </citation>
    </reference>
  </bibliography>
  <annotation xmlns="http://namesforlife.com/ns/common">
    <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="17:22:39" time-formatted="17:22 PM" />
    <modified curator="NamesforLife Curator" date="2016-09-19" date-formatted="September 19, 2016" time="18:52:54" time-formatted="18:52 PM" />
    <created curator="Dorothea Rohlfs" date="2010-02-02" date-formatted="February 2, 2010" time="08:14:49" time-formatted="8:14 AM" />
  </annotation>
</taxon>
