J. D. Watson. The Double Helix: A Personal Account of the Discovery of the Structure of DNA. Atheneum, 1968. | |
G. Charvin, J. F. Allemand, T. Strick, D. Bensimon, and V. Croquette. Twisting DNA: single molecule studies. Contemporary Physics, 45(5):383-403, 2004. CrossRef | |
L. Yi, S. XinCheng, W. JingJing, B. Lei, Z. ZhiLing, and PANG DaiWen. Measuring radial youngs modulus of dna by tapping mode afm. Chinese Science Bulletin, 52(23):3189-3192, 2007. CrossRef | |
T. R. Strick, J. F. Allemand, D. Bensimon, and V. Croquette. Behaviour of supercoiled DNA. Biophysical Journal, 74:2016-2028, 1998. CrossRef | |
C. Bustamante, S. B. Smith, J. Liphardt, and D. Smith. Single-molecule studies of DNA mechanics. Current Opinion on Structural Biology, 10:279-285, 2000. | |
N. Bruant, D. Flatters, R. Lavery, and D. Genest. From atomic to mesoscopic descriptions of the internal dynamics of DNA. Biophysical Journal, 77:2366-2376, 1999. CrossRef | |
F. Lankas, J. Sponer, P. Hobza, and J. Langowski. Sequence-dependent elastic properties of DNA. Journal of Molecular Biology, 299(3):695-709, 2000. CrossRef | |
A. Balaeff, L. Mahadevan, and Klaus Schulten. Elastic rod model of a DNA loop in the lac operon. Physical Review Letters, 83(23):4900-4903, 1999. CrossRef | |
N. G. Hunt and J. E. Hearst. Elastic model of DNA supercoiling in the infinite-length limit. Journal of Chemical Physics, 95(12):9329-336, 1991. CrossRef | |
D. M. Stump, P. J. Watson, and W. B. Fraser. Mathematical modelling of interwound DNA supercoils. Journal of Biomechanics, 33:407-413, 2000. CrossRef | |
K. A. Hoffman. Methods for determining stability in continuum elastic-rod models in DNA. Philosophical transactions of the Royal Society of London A, 362:1301-1315, 2004. CrossRef | |
R. L. Ricca and F Maggioni. Mulitple folding and packing in DNA modeling. Computers and Mathematics in Applications, 55:1044-1053, 2008. CrossRef | |
M. Wadati and H. Tsuru. Elastic model of looped DNA. Physica, 21D:213-226, 1986. | |
I. Tobias, D. Swigon, and B. D. Coleman. Elastic stability of DNA configurations I: General theory. Physical Review E, 61(1):747-758, 2000. CrossRef | |
I. Tobias, D. Swigon, and B. D. Coleman. Elastic stability of DNA configurations II: Supercoiled plasmids with self-contact. Physical Review E, 61(1):759-770, 2000. CrossRef | |
T. Schlick. Modeling superhelical DNA: recent analytical and dynamic approaches. Current opinion in Structural Biology, 5:245-262, 1995. CrossRef | |
M. G. Munteanu, K. Vlahovicek, S. Parthasarathy, I. Simon, and S. Pongor. Rod models of DNA: sequence-dependent anisotropic elastic modelling of local bending phenomena. Trends in Biochemical Sciences, 23(9):341-347, 1998. CrossRef | |
W. K. Olson and V. B. Zhurkin. Modeling DNA deformations. Current opinion in Structural Biology, 10:286-297, 2000. CrossRef | |
M. M. Gromiha, M. G. Munteanu, A. Gabrielian, and S. Pongor. Anisotropic elastic bending models of DNA. Journal of Biological Physics, 22:227-243, 1996. CrossRef | |
W. R. Bauer, R. A. Lund, and J. H. White. Twist and writhe of a DNA loop containing intrinsic bends. Proceedings of National Academy of Science USA, 90:833 - 837, 1993. CrossRef | |
O. C. Zienkiewicz, R. L. Taylor, and J. z. Zhu. The Finite Element Method - Its Basis & Fundamentals. Butterworth-Heinemann, 2005. | |
R. D. Cook, D. S. Malkus, and M. E. Plesha. Concepts and Applications of Finite Element Method. John Wiley & Sons, 2000. | |
C. S. Jog. Foundations and Applications of Mechanics - Vol. 1 Continuum Mechanics. Narosa Publications, 2002. | |
S. P. Timoshenko. Strength of Materials - Vol 1. CBS Publications, 2004. |
A Computational Model to Determine the Effect of Interconnecting Hydrogen Bonds in DNA Deformation
Kambham TanujaRelated information
1 Department of Mechanical Engineering, Indian Institute of Technology Madras, Chennai, India
, Abhijit SarkarRelated information1 Department of Mechanical Engineering, Indian Institute of Technology Madras, Chennai, India
, Sarit DasRelated information1 Department of Mechanical Engineering, Indian Institute of Technology Madras, Chennai, India