Taxon DOI
10.1601/tx.9761
Name
 Nedashkovskaya et al. 2005 emend. Osman et al. 2018
Taxonomic Rank
genus
Methodology
Nomenclatural Taxonomy [1980-2022]
Incertae sedis taxa are placed using SOSCC (Garrity and Lilburn 2008)
Parent
Taxon RecordName Record
Munoz et al. 2016
Members
Nedashkovskaya et al. 2005 emend. Hahnke et al. 2016
Zhou et al. 2007 emend. Zhang et al. 2013
Wu et al. 2016
Chhetri and Seo 2021
Liu et al. 2019
Singh et al. 2017
Osman et al. 2016
Xu et al. 2021
Osman et al. 2018
Kang et al. 2021
Singh et al. 2015
Chhetri et al. 2019
Subhash et al. 2014
Xu et al. 2014
Liu et al. 2021
Srinivasan et al. 2015
Singh et al. 2014 emend. García-López et al. 2019
Joung et al. 2013
Zhang et al. 2008
Park et al. 2016
Zhou et al. 2016
Dwivedi et al. 2013
Mo et al. 2020
Nayyar et al. 2016
Dastager et al. 2010
Subhash et al. 2013
Chhetri et al. 2020
Liu et al. 2022
Xu et al. 2012
Shi et al. 2022
Singh et al. 2013 emend. García-López et al. 2019
Raichand et al. 2011
(Suresh et al. 2006) Wang et al. 2010 emend. Zhang et al. 2013
Subhash et al. 2014
Kim et al. 2016
Kang et al. 2013
Joung et al. 2011
Osman et al. 2018
Dai et al. 2014
Kim et al. 2018
Zhang et al. 2013
Mahato et al. 2016 emend. García-López et al. 2019
Kohli et al. 2016 emend. García-López et al. 2019
Wang et al. 2010
Cao et al. 2014
Type Status
Taxonomy
The taxonomic placement of this genus within the root Universal Root.
  Woese et al. 1990
  (None 2015) Woese et al. 1990
  corrig. Krieg et al. 2021
  Nakagawa 2012 emend. García-López et al. 2019
  Leadbetter 1974 (Approved Lists 1980) emend. García-López et al. 2019
  Munoz et al. 2016
  Nedashkovskaya et al. 2005 emend. Osman et al. 2018

The taxonomy from the rank of class and below is based upon currently published taxonomic opinion. For a complete taxonomy, refer to The Taxonomic Outline of Bacteria and Archaea, Release 7.7.
Citation
When referring to this Abstract, please use its Digital Object Identifier.
Taxon Abstract for the genus Pontibacter Nedashkovskaya et al. 2005 emend. Osman et al. 2018. Retrieved . https://doi.org/10.1601/tx.9761.
Source File
This information was last reviewed on August 11, 2022.

References

  1. Cao H, Nie Y, Zeng X-C, Xu L, He Z, Luo X, Wu R. Pontibacter yuliensis sp. nov., isolated from soil. Int J Syst Evol Microbiol 2014; 64:968-972. https://doi.org/10.1099/ijs.0.055004-0 [PubMed].
  2. Wu YH, Zhou P, Jian SL, Liu ZS, Wang CS, Oren A, Xu XW. Pontibacter amylolyticus sp. nov., isolated from a deep-sea sediment hydrothermal vent field. Int J Syst Evol Microbiol 2016; 66:1760-1767. https://doi.org/10.1099/ijsem.0.000944 [PubMed].
  3. Munoz R, Rosselló-Móra R, Amann R. Revised phylogeny of Bacteroidetes and proposal of sixteen new taxa and two new combinations including Rhodothermaeota phyl. nov. Syst Appl Microbiol 2016; 39:281-296. https://doi.org/10.1016/j.syapm.2016.04.004 [PubMed].
  4. Kim DI, Lee JH, Kang JW, Ka J-O, Seong CN. Pontibacter rugosus sp. nov., isolated from seawater. Int J Syst Evol Microbiol 2016; 66:4389-4394. https://doi.org/10.1099/ijsem.0.001362 [PubMed].
  5. Singh AK, Garg N, Sangwan N, Negi V, Kumar R, Vikram S, Lal R. Pontibacter ramchanderi sp. nov., isolated from hexachlorocyclohexane-contaminated pond sediment. Int J Syst Evol Microbiol 2013; 63:2829-2834. https://doi.org/10.1099/ijs.0.045948-0 [PubMed].
  6. Osman G, Zhang T, Lou K, Gao Y, Chang W, Lin Q, Hong-Mei Y, Huo X-D, Wang N. Pontibacter aydingkolensis sp. nov., isolated from soil of a salt lake in Xinjiang, China. Int J Syst Evol Microbiol 2016; 66:5523-5528. https://doi.org/10.1099/ijsem.0.001551 [PubMed].
  7. Dastager SG, Raziuddin QS, Deepa CK, Li W-J, Pandey A. Pontibacter niistensis sp. nov., isolated from forest soil. Int J Syst Evol Microbiol 2010; 60:2867-2870. https://doi.org/10.1099/ijs.0.019935-0 [PubMed].
  8. Shi S, Yang L, Jiang M, Wang Y, Zhou Y, Prathepha P, Ihsan YN. Pontibacter qinzhouensis sp. nov., isolated from rhizosphere soil of a mangrove plant Rhizophora stylosa. Arch Microbiol 2022; 204:298-298. https://doi.org/10.1007/s00203-022-02808-x [PubMed].
  9. Singh P, Kumari R, Nayyar N, Lal R. Pontibacter aurantiacus sp. nov. isolated from hexachlorocyclohexane (HCH) contaminated soil. Int J Syst Evol Microbiol 2017; 67:1400-1407. https://doi.org/10.1099/ijsem.0.001833 [PubMed].
  10. Zhou Y-X, Xie Z-H, Zhao J-X, Du Z-J, Chen G-J. Pontibacter locisalis Sy30T sp. nov. isolated from soil collected from an abandoned saltern. Antonie van Leeuwenhoek 2016; 109:415-420. https://doi.org/10.1007/s10482-016-0646-0 [PubMed].
  11. Liu Z-W, Zhang J, Yu Y, Li H-R, Du Z-J. Pontibacter arcticus sp. nov., isolated from rhizosphere soil of Saxifraga oppositifolia. Int J Syst Evol Microbiol 2019; 69:3609-3615. https://doi.org/10.1099/ijsem.0.003668 [PubMed].
  12. Xu M, Wang Y, Dai J, Jiang F, Rahman E, Peng F, Fang C. Pontibacter populi sp. nov., isolated from the soil of a Euphrates poplar (Populus euphratica) forest. Int J Syst Evol Microbiol 2012; 62:665-670. https://doi.org/10.1099/ijs.0.030122-0 [PubMed].
  13. Mo K-L, Wang L, Wu Q-J, Ye L, Liu X-d, Hu Y-H, Huang H-Q. Pontibacter mangrovi sp. nov., isolated from mangrove sediment. Int J Syst Evol Microbiol 2020; 70:4245-4249. https://doi.org/10.1099/ijsem.0.004280 [PubMed].
  14. Liu D, Xiong Q, Zhao J, Fang Z, Zhang G. Pontibacter flavimaris sp. nov., of the family Hymenobacteraceae, isolated from marine sediment. Int J Syst Evol Microbiol 2021; 71:. https://doi.org/10.1099/ijsem.0.004958 [PubMed].
  15. Wang Y, Zhang K, Cai F, Zhang L, Tang Y, Dai J, Fang C. Pontibacter xinjiangensis sp. nov., in the phylum ‘Bacteroidetes’, and reclassification of [Effluviibacter] roseus as Pontibacter roseus comb. nov. Int J Syst Evol Microbiol 2010; 60:99-103. https://doi.org/10.1099/ijs.0.011395-0 [PubMed].
  16. Osman G, Wang Z, Wang N, Shayimu G, Hou M, Guo W, Yang X. Pontibacter silvestris sp. nov., isolated from the soil of a Populus euphratica forest and emended description of the genus Pontibacter. Int J Syst Evol Microbiol 2018; 68:3243-3247. https://doi.org/10.1099/ijsem.0.002972 [PubMed].
  17. Chhetri G, Seo T. Pontibacter aquaedesilientis sp. nov., isolated from Jeongbang Waterfall, Jeju Island. Int J Syst Evol Microbiol 2021; 71:. https://doi.org/10.1099/ijsem.0.005155 [PubMed].
  18. Park S, Park J-M, Lee KH, Yoon J-H. Pontibacter litorisediminis sp. nov., isolated from a tidal flat. Int J Syst Evol Microbiol 2016; 66:4172-4178. https://doi.org/10.1099/ijsem.0.001331 [PubMed].
  19. Ludwig W, Euzeby J, Whitman WB. Taxonomic outlines of the phyla Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), ­Acidobacteria, Fibrobacteres, Fusobacteria, ­Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes. In: Krieg NR, Staley JT, Brown DR, Hedlund BP, Paster BJ, Ward NL, Ludwig W, Whitman WB (eds), Bergey's Manual of Systematic Bacteriology, Second Edition, Volume 4, Springer, New York, 2010, p. 21-24.
  20. Zhou Y, Wang X, Liu H, Zhang KY, Zhang YQ, Lai R, Li WJ. Pontibacter akesuensis sp. nov., isolated from a desert soil in China. Int J Syst Evol Microbiol 2007; 57:321-325. https://doi.org/10.1099/ijs.0.64716-0 [PubMed].
  21. Dwivedi V, Niharika N, Lal R. Pontibacter lucknowensis sp. nov., isolated from a exachlorocyclohexane dump site. Int J Syst Evol Microbiol 2013; 63:309-313. https://doi.org/10.1099/ijs.0.040147-0 [PubMed].
  22. Nedashkovskaya OI, Kim SB, Suzuki M, Shevchenko LS, Lee MS, Lee KH, Park MS, Frolova GM, Oh HW, Bae KS, Park HY, Mikhailov VV. Pontibacter actiniarum gen. nov., sp. nov., a novel member of the phylum 'Bacteroidetes', and proposal of Reichenbachiella gen. nov. as a replacement for the illegitimate prokaryotic generic name Reichenbachia Nedashkovskaya et al. 2003. Int J Syst Evol Microbiol 2005; 55:2583-2588. https://doi.org/10.1099/ijs.0.63819-0 [PubMed].
  23. Singh AK, Garg N, Lata P, Kumar R, Negi V, Vikram S, Lal R. Pontibacter indicus sp. nov., isolated from hexachlorocyclohexane-contaminated soil. Int J Syst Evol Microbiol 2014; 64:254-259. https://doi.org/10.1099/ijs.0.055319-0 [PubMed].
  24. Mahato NK, Tripathi C, Nayyar N, Singh AK, Lal R. Pontibacter ummariensis sp. nov., isolated from a hexachlorocyclohexane-contaminated soil. Int J Syst Evol Microbiol 2016; 66:1080-1087. https://doi.org/10.1099/ijsem.0.000840 [PubMed].
  25. Subhash Y, Sasikala Ch, Ramana ChV. Pontibacter ruber sp. nov. and Pontibacter deserti sp. nov., isolated from the desert. Int J Syst Evol Microbiol 2014; 64:1006-1011. https://doi.org/10.1099/ijs.0.058842-0 [PubMed].
  26. Osman G, Gao Y, Wang N, Mahmud O, Sun J, Zhang T, Zhan F, Zhang Z, Lou K. Pontibacter brevis sp. nov., isolated from rhizosphere soil of Tamarix ramosissima. Int J Syst Evol Microbiol 2018; 68:81-86. https://doi.org/10.1099/ijsem.0.002455 [PubMed].
  27. Kohli P, Nayyar N, Sharma A, Singh AK, Lal R. Pontibacter virosus sp. nov., isolated from a hexachlorocyclohexane contaminated dumpsite. Int J Syst Evol Microbiol 2016; 66:4395-4400. https://doi.org/10.1099/ijsem.0.001363 [PubMed].
  28. Raichand R, Kaur I, Singh NK, Mayilraj S. Pontibacter rhizosphera sp. nov., isolated from rhizosphere soil of an Indian medicinal plant Nerium indicum. Antonie van Leeuwenhoek 2011; 100:129-135. https://doi.org/10.1007/s10482-011-9573-2 [PubMed].
  29. Zhang L, Zhang Q, Luo X, Tang Y, Dai J, Li Y, Wang Y, Chen G, Fang C. Pontibacter korlensis sp. nov., isolated from the desert of Xinjiang, China. Int J Syst Evol Microbiol 2008; 58:1210-1214. https://doi.org/10.1099/ijs.0.65667-0 [PubMed].
  30. Xu J, Sun L, Sun Z, Xing X, Li J, Lu X, Huang Y, Ren Q. Pontibacter beigongshangensis sp. nov., Isolated from the Mash of Wine. Curr Microbiol 2019; 76:1525-1530. https://doi.org/10.1007/s00284-019-01782-w [PubMed].
  31. Joung Y, Kim H, Ahn T-S, Joh K. Pontibacter salisaro sp. nov., isolated from a clay tablet solar saltern in Korea. J Microbiol 2011; 49:290-293. https://doi.org/10.1007/s12275-011-0093-6 [PubMed].
  32. Kim D-U, Kim J-Y, Jang JH, Kim MK. Pontibacter terrae sp. nov., isolated from soil. Int J Syst Evol Microbiol 2018; 68:3184-3189. https://doi.org/10.1099/ijsem.0.002964 [PubMed].
  33. Xu L, Zeng X-C, Nie Y, Luo X, Zhou E, Zhou L, Pan Y, Li W. Pontibacter diazotrophicus sp. nov., a Novel Nitrogen-Fixing Bacterium of the Family Cytophagaceae. PLoS One 2014; 9:e92294. https://doi.org/10.1371/journal.pone.0092294 [PubMed].
  34. Chhetri G, Kim J, Kim I, Kim MK, Seo T. Pontibacter chitinilyticus sp. nov., a novel chitin-hydrolysing bacterium isolated from soil. Antonie van Leeuwenhoek 2019; 112:1011-1018. https://doi.org/10.1007/s10482-019-01235-1 [PubMed].
  35. Chhetri G, Kim J, Kim H, Kim I, Seo T. Pontibacter oryzae sp. nov., a carotenoid-producing species isolated from a rice paddy field. Antonie van Leeuwenhoek 2019; 112:1705-1713. https://doi.org/10.1007/s10482-019-01298-0 [PubMed].
  36. Liu F, Liu Y-Y, Li Y-Q, Lei R-F, Ma Q, Abudourousuli D, Rouzi Z, Aosiman M, An D-D, Li W-J. Pontibacter pamirensis sp. nov., isolated from saline-alkaline soil. Int J Syst Evol Microbiol 2022; 72:. https://doi.org/10.1099/ijsem.0.005200 [PubMed].
  37. Kang M, Chhetri G, Kim J, Kim I, Seo T. Pontibacter cellulosilyticus sp. nov., a carboxymethyl cellulose-hydrolysing bacterium isolated from coastal water. Int J Syst Evol Microbiol 2021; 71:. https://doi.org/10.1099/ijsem.0.005058 [PubMed].
  38. Kang JY, Joung Y, Chun J, Kim H, Joh K, Jahng KY. Pontibacter saemangeumensis sp. nov., isolated from seawater. Int J Syst Evol Microbiol 2013; 63:565-569. https://doi.org/10.1099/ijs.0.039867-0 [PubMed].
  39. Srinivasan S, Lee J-J, Lee S-S, Kim MK. Pontibacter humi sp. nov., isolated from mountain soil. Curr Microbiol 2014; 69:263-269. https://doi.org/10.1007/s00284-014-0580-1 [PubMed].
  40. Joung Y, Kim H, Lee B-I, Kang H, Jang TY, Kwon O-S, Joh K. Pontibacter jeungdoensis sp. nov., isolated from a solar saltern in Korea. J Microbiol 2013; 51:531-535. https://doi.org/10.1007/s12275-013-2324-5 [PubMed].
  41. Subhash Y, Tushar L, Sasikala Ch, Ramana ChV. Erythrobacter odishensis sp. nov. and Pontibacter odishensis sp. nov. isolated from dry soil of a solar saltern. Int J Syst Evol Microbiol 2013; 63:4524-4532. https://doi.org/10.1099/ijs.0.052183-0 [PubMed].
  42. Singh AK, Garg N, Lal R. Pontibacter chinhatensis sp. nov., isolated from pond sediment containing discarded hexachlorocyclohexane isomer waste. Int J Syst Evol Microbiol 2015; 65:2248-2254. https://doi.org/10.1099/ijs.0.000241 [PubMed].
  43. Dai J, Xu M, Peng F, Jiang F, Chen X, Wang Z, Fang C. Pontibacter soli sp. nov., isolated from the soil of a Populus rhizosphere in Xinjiang, China. Antonie van Leeuwenhoek 2014; 105:65-72. https://doi.org/10.1007/s10482-013-0053-8 [PubMed].
  44. Nayyar N, Kohli P, Mahato NK, Lal R. Pontibacter mucosus sp. nov., isolated from hexachlorocyclohexane contaminated pond sediment. Int J Syst Evol Microbiol 2016; 66:2234-2240. https://doi.org/10.1099/ijsem.0.001013 [PubMed].
  45. Zhang L, Zhu L, Wei L, Li C, Wang Y, Shen X. Pontibacter toksunensis sp. nov., isolated from soil, and emended descriptions of Pontibacter roseus and Pontibacter akesuensis. Int J Syst Evol Microbiol 2013; 63:4462-4468. https://doi.org/10.1099/ijs.0.053165-0 [PubMed].